Template Struct genetic_parameters¶

Defined in File simparams.hpp

Struct Documentation¶

template<typename genetic_value, typename mutation_function, typename recombination_function, typename interlocus_recombination_function, typename parent_haploid_genome_swapping_function> struct fwdpp::genetic_parameters¶

Hold types for genetic operations.

This is a simplistic struct to encapsulate the types needed for “doing the genetics” in a simulation.

There is no effort to ensure that the types reflect valid policies upon instantiation or construction.

For a single-locus simulation, interlocus_recombination_function is expected to be std::nullptr_t

The heavy use of lambdas in fwdpp means that it is, in practice, nearly impossible to know the template parameter types. Thus, objects of this type are made by calling fwdpp::make_genetic_parameters.

Version: 0.7.4 Added to library
Version: 0.9.0 gvalue no longer const

Public Functions

template<typename gv, typename mut, typename rec, typename swapper> genetic_parameters(gv &&gvalue_param, mut &&generate_mutations_param, rec &&generate_breakpoints_param, swapper &&haploid_genome_swapper_param)¶

template<typename gv, typename mut, typename rec, typename irec, typename swapper> genetic_parameters(gv &&gvalue_param, mut &&generate_mutations_param, rec &&generate_breakpoints_param, irec &&interlocus_recombination_param, swapper &&haploid_genome_swapper_param)¶

Public Members

genetic_value gvalue¶

const mutation_function generate_mutations¶

const recombination_function generate_breakpoints¶

const interlocus_recombination_function interlocus_recombination¶

const parent_haploid_genome_swapping_function haploid_genome_swapper¶

flagged_mutation_queue mutation_recycling_bin¶

flagged_haploid_genome_queue haploid_genome_recycling_bin¶

std::vector<uint_t> neutral¶

std::vector<uint_t> selected¶