Contents:
Fundamental types
Mutation and recombination
Technical documentation
The primary namespace defined by this library.
Contents
Namespaces
Classes
Functions
Typedefs
Namespace fwdpp::data_matrix_details
Namespace fwdpp::debug
Namespace fwdpp::detail
Namespace fwdpp::enum_bitflags
Namespace fwdpp::extensions
Namespace fwdpp::fwdpp_internal
Namespace fwdpp::gsl
Namespace fwdpp::internal
Namespace fwdpp::io
Namespace fwdpp::meta
Namespace fwdpp::poptypes
Namespace fwdpp::strong_types
Namespace fwdpp::sugar
Namespace fwdpp::tags
Namespace fwdpp::traits
Namespace fwdpp::ts
Namespace fwdpp::util
Namespace fwdpp::validators
Struct additive_diploid
Template Struct binomial_interval_t
Template Struct binomial_point_t
Struct data_matrix
Struct emplace_back
Struct equal_eps
Template Struct fixed_number_crossovers_t
Struct genetic_map_unit
Template Struct genetic_parameters
Struct genetic_value_is_fitness
Struct genetic_value_is_trait
Template Struct haploid_genome_base
Struct haplotype_dependent_trait_value
Struct mendel
Struct multiplicative_diploid
Struct mutation
Struct mutation_base
Struct no_selection
Template Struct poisson_interval_t
Template Struct poisson_point_t
Struct remove_neutral
Struct remove_nothing
Struct site_dependent_genetic_value
Struct state_matrix
Template Struct wrapped_range
Class genetic_map
Template Class GSLrng_t
Template Class nested_forward_lists
Class nested_forward_lists_overflow
Template Function fwdpp::add_mutation
Template Function fwdpp::add_mutations
Function fwdpp::assign_is_fitness_value(const trait&)
Function fwdpp::assign_is_fitness_value(const fitness&)
Function fwdpp::assign_is_trait_value(const fitness&)
Function fwdpp::assign_is_trait_value(const trait&)
Template Function fwdpp::begin(wrapped_range<T>&)
Template Function fwdpp::begin(const wrapped_range<T>&)
Template Function fwdpp::change_neutral
Function fwdpp::col_sums
Template Function fwdpp::compact_mutations
Template Function fwdpp::dispatch_recombination_policy(const recombination_policy&, DiploidType&&, haploid_genome_t&&, haploid_genome_t&&, MutationContainerType&&)
Function fwdpp::empty_haploid_genome_queue
Function fwdpp::empty_mutation_queue
Template Function fwdpp::end(wrapped_range<T>&)
Template Function fwdpp::end(const wrapped_range<T>&)
Template Function fwdpp::filter_keys
Template Function fwdpp::generate_breakpoints
Template Function fwdpp::generate_new_mutations
Template Function fwdpp::genotype_matrix
Template Function fwdpp::haplotype_matrix
Template Function fwdpp::infsites_mutation
Template Function fwdpp::infsites_popgenmut
Template Function fwdpp::make_genetic_parameters(GeneticValueType&&, MutationFunctionType&&, RecombinationFunctionType&&, SwappingFunctionType&&)
Template Function fwdpp::make_genetic_parameters(GeneticValueType&&, MutationFunctionType&&, RecombinationFunctionType&&)
Template Function fwdpp::make_haploid_genome_queue
Template Function fwdpp::make_mut_queue
Template Function fwdpp::make_wrapped_range
Template Function fwdpp::mutate_recombine
Template Function fwdpp::mutate_recombine_update
Template Function fwdpp::mutation_keys
Template Function fwdpp::rbegin
Template Function fwdpp::recbinder
Template Function fwdpp::recycle_haploid_genome
Template Function fwdpp::recycle_mutation_helper
Template Function fwdpp::rend
Function fwdpp::row_sums
Template Function fwdpp::sample_diploid(const gsl_rng *, haploid_genome_cont_type<haploid_genome_type, haploid_genome_cont_type_allocator>&, diploid_vector_type<diploid_geno_t, diploid_vector_type_allocator>&, mutation_cont_type<mutation_type, mutation_cont_type_allocator>&, std::vector<uint_t>&, const uint_t&, const uint_t&, const double&, const mutation_model&, const recombination_policy&, const diploid_fitness_function&, typename haploid_genome_type::mutation_container&, typename haploid_genome_type::mutation_container&, const double, const mutation_removal_policy)
Template Function fwdpp::sample_diploid(const gsl_rng *, haploid_genome_cont_type<haploid_genome_type, haploid_genome_cont_type_allocator>&, diploid_vector_type<diploid_geno_t, diploid_vector_type_allocator>&, mutation_cont_type<mutation_type, mutation_cont_type_allocator>&, std::vector<uint_t>&, const uint_t&, const double&, const mutation_model&, const recombination_policy&, const diploid_fitness_function&, typename haploid_genome_type::mutation_container&, typename haploid_genome_type::mutation_container&, const double, const mutation_removal_policy)
Template Function fwdpp::sample_individuals
Template Function fwdpp::sort_keys
Template Function fwdpp::update_mutations(MutationContainerType&, mutation_lookup_table&, std::vector<uint_t>&, const unsigned)
Template Function fwdpp::update_mutations(const MutationContainerType&, mutation_lookup_table&, std::vector<uint_t>&)
Template Function fwdpp::update_mutations(MutationContainerType&, fixation_container_t&, fixation_time_container_t&, mutation_lookup_table&, std::vector<uint_t>&, const unsigned&, const unsigned&)
Template Function fwdpp::update_mutations_n
Template Function fwdpp::zero_out_haploid_genomes
Typedef fwdpp::binomial_interval
Typedef fwdpp::binomial_point
Typedef fwdpp::diploid_population
Typedef fwdpp::fitness
Typedef fwdpp::fixed_number_crossovers
Typedef fwdpp::flagged_haploid_genome_queue
Typedef fwdpp::flagged_mutation_queue
Typedef fwdpp::gsl_ran_discrete_t_ptr
Typedef fwdpp::GSL_RNG_MT19937
Typedef fwdpp::GSL_RNG_TAUS2
Typedef fwdpp::GSLrng_mt
Typedef fwdpp::haploid_genome
Typedef fwdpp::haplotype_dependent_fitness
Typedef fwdpp::instead
Typedef fwdpp::poisson_interval
Typedef fwdpp::poisson_point
Typedef fwdpp::site_dependent_fitness
Typedef fwdpp::trait
Typedef fwdpp::uint_t